PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT20421
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family bHLH
Protein Properties Length: 281aa    MW: 31147.9 Da    PI: 6.5138
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT20421genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.84.1e-13103152355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++iN+++  L++l+P +   ++k   Ka++L + ++Y++sLq
  EMT20421 103 NNHSLAERFRREKINERMKHLQDLVPGC---NKKITGKAMMLDEIINYVQSLQ 152
               58**************************...8888*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.71E-1298156No hitNo description
SuperFamilySSF474592.09E-1899168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.897100151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-10103152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-18104169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-11106157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MDFDEHVLFP MHNAGMQDGV QFYNPTAGGT ELSRNMSMEK GLKGGKRKGS GEGSSTMHSQ  60
QEETGAMSQR EVSMERAGEK EGDAASNRED YVHIRAKRGQ ATNNHSLAER FRREKINERM  120
KHLQDLVPGC NKKITGKAMM LDEIINYVQS LQRQVEFLSM KLSAVSPELN CDLDLQDILC  180
PQDARSTFPG YGQRLGNVHP NNNMYRASQP GLSRPELYGN GIIIPNHPAS VHMARTAQQL  240
SAFPHRSIVW DEELGNVGPS AFPSDVVGAS SLENSESMKV E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003558437.11e-159PREDICTED: transcription factor bHLH74-like
TrEMBLR7WCT10.0R7WCT1_AEGTA; Transcription factor bHLH49
STRINGMLOC_64018.11e-168(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45362933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-42bHLH family protein